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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10137052 chr14:39793656 A/G LOC647288 chr13:75811890-75814517:- -0.42 -6.64 1.1E-10 Box Plot
BLCA rs10137352 chr14:39793661 G/C LOC647288 chr13:75811890-75814517:- -0.43 -6.82 3.47E-11 Box Plot
BLCA rs10138024 chr14:39753719 C/T LOC647288 chr13:75811890-75814517:- -0.39 -6.24 1.17E-9 Box Plot
BLCA rs10138191 chr14:39753718 G/T LOC647288 chr13:75811890-75814517:- -0.39 -6.24 1.17E-9 Box Plot
BLCA rs10141546 chr14:74965124 A/C DCAF5 chr14:69517598-69619867:- 0.69 6.16 1.85E-9 Box Plot
BLCA rs10141546 chr14:74965124 A/C NUMB chr14:73741815-73930348:- 0.69 6.09 2.74E-9 Box Plot
BLCA rs10142 chr7:33046197 C/T FKBP9L chr7:55748767-55780945:- 0.35 8.38 1.05E-15 Box Plot
BLCA rs10147791 chr14:99404995 A/T BRF1 chr14:105675623-105781926:- -0.75 -6.25 1.07E-9 Box Plot
BLCA rs10147791 chr14:99404995 A/T C14orf102 chr14:90744398-90798279:- -0.84 -6.07 3.0E-9 Box Plot
BLCA rs10151659 chr14:39745203 A/C LOC647288 chr13:75811890-75814517:- -0.39 -6.34 6.48E-10 Box Plot
BLCA rs10152669 chr15:64117817 G/A VCX chrX:7810303-7812184:+ 0.35 6.13 2.18E-9 Box Plot
BLCA rs10152687 chr15:64117989 G/T VCX chrX:7810303-7812184:+ 0.35 6.07 3.12E-9 Box Plot
BLCA rs10162550 chr14:39740406 C/T LOC647288 chr13:75811890-75814517:- 0.39 6.38 5.11E-10 Box Plot
BLCA rs10162809 chr15:64091025 G/T VCX chrX:7810303-7812184:+ 0.36 6.26 1.01E-9 Box Plot
BLCA rs10163125 chr15:64092870 G/C VCX chrX:7810303-7812184:+ 0.36 6.41 4.23E-10 Box Plot